Popular GitHub Repositories for Electronic Health Records

Code for "Graph Neural Network on Electronic Health Records for Predicting Alzheimer’s Disease"

FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records

Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record

Code for the paper: Multi-Label Clinical Time-Series Generation via Conditional GAN (IEEE TKDE)

[Python] Additional works on Edward Choi's medGAN (generative adversarial network for electronic health records). In particular: boosting the prediction score using dataset augmentation.

Taking off-the-shelf HuggingFace models and training them on EHR data

RadioLOGIC: A general model for processing unstructured reports and making decisions in healthcare

Detecting the functioning level of a patient from a free-text clinical note in Dutch.

Source code for the paper "Generating Synthetic Training Data for Supervised De-Identification of Electronic Health Records" in Future Internet (2021).