Popular GitHub Repositories for Single Cell Rna Seq

scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics

Wasserstein Generative Adversarial Network for analysing scRNAseq data

Deep exponential families for single-cell data.

scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics

Tutorials for using BRIE

SCassist : An AI Based Workflow Assistant for Single-Cell Analysis

Pytorch implementation of "Multi-domain translation between single-cell imaging and sequencing data using autoencoders" (https://www.nature.com/articles/s41467-020-20249-2) with custom models.