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Predicting Future Influenza Virus Sequences with Machine Learning
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Official code repository for GATK versions 4 and up
Python and C++ code for reading and writing genomics data.
Interactive network visualization in Python and Dash, powered by Cytoscape.js
a JavaScript DNA, RNA, and protein sequence viewer
Genomic Pre-trained Network
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
GENA-LM is a transformer masked language model trained on human DNA sequence.
Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification
?Crowd-sourced COVID-19 reporting and assessment system.